Captain: Cryptos
First mate: Veil
Operator: Unknown
Other crew: Liaisons
Affiliation: Cypherites

Mjolnir II

Captain: Colt
First mate: Unknown
Operator: Unknown
Other crew: Unknown
Affiliation: Zion
(Note - Colt's details in game list his crew as Logos II, likely for convenience of contact with liaisons)

Nabonidus

Captain: Morpheus
First mate: Unknown
Operator: Unknown
Other crew: Unknown
Affiliation: Zion/Independent

Notes: This ship was operated by Morpheus following the truce and the destruction of the Nebuchadnezzar, signals with the ID signature of this ship lead operatives to believe that Morpheus was alive, but in fact it was a deception by the General.

Neo's Hope

Captain: Kid
First mate: Shimada
Operator: Unknown
Other crew: Liaisons
Affiliation: EPN

Novalis II

Captain: Sawayaka
First mate: WanNi
Pilot: Neurophyte
Operator: Tamarin
Other crew: Vashuo, Lelan, Toorima, Oniyuzu, Odran, Al3xandra
Affiliation: Zion

Notes: Rebuilt from the hull of the Novalis, this was one of the first new Hovercraft crews commisioned by Zion. One of it's crew, Neurophyte was infected by a dangerous "killcode" with strange  and deadly results. Later one of their membership, Toorima killed Vashuo and escaped Zion encarceration and revealed herself to be Veil, co-leader of the Cypherite organization. Since this time little has been seen of the crew in active operations.

Scanline

Captain: Unknown
First mate: Unknown
Pilot: Unknown
Operator: Unknown
Other crew: Strayshot, Acheronia, Theptism, Trifid, Soniya (Recursion), Alethiana, Daxil, Derouter, Leton, Runtrace (Syntax), Betzalel, Kaveri, Palliate (Vector), Bradyn, FiveTool.
Affiliation: Independent

Notes: The ship used by "intruder" Carlyne. Details were given to Zion, mentioning a streamlined "Unibody," immunity to EMP and internal flight system. Little else is known other than it is meant to be smaller than Halborn's craft.

Proditio

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Unconfirmed

Notes: Waiting for verification

Achilles

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This crew were captured and held by exiles, who claimed they had attacked their base, they were rescued eventually by another Zion crew. The full details remain unclear.

Odyssey

Captain: Tyrell
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This ship's captain seems to have a close relationship with Commander Lock, who referred to him as Ty. An intercepted communique between the two of them shows he was tasked with checking up on Morpheus and had been monitoring Machine communications concerning him.

Terra Nova

Captain: Unknown
First Mate:Unknown
Operator: 63 active operators, none named
Other Crew: Enmascarado, Gemaskeerd, 140 matrix operatives, 20 other crew
Affiliation: Zion

Notes: A Zion Hoverbarge housinga large number of operative was sabotaged by two prominent Cypherites early on in their career, who sabotaged the craft's Hoverpads causing a drastic crash while most of the crew were jacked in. The craft was notable for utilising all sorts of 'real' Earth civilisation chairs as jack in points. 

Unnamed Machine Ship

Captain: Unknown
First Mate:Unknown
Operator: Unknown
Other Crew: Gemaskeerd, Enmascarado
Affiliation: Machines

Notes: This ship was loyal to the Machines, the captain had even recieved a replacement artifical eye as a token of their appreciation. For unknown reasons (especially in light of recent revelations) the crew were killed by Cypherites.

Sedna

Captain: Redhand
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This crew led an aggressive boarding operation against the crew of the Novalis 2. Alex and her crew were disoriented form rapid jackout and on learning of the assasination of Vashuo, one of their number. Because of this they resisted, so Sedna's crew employed taser darts from their ship to detain them. They were detaining the crew because it was suspected that Veil, a high ranking Cypherite, was on board, though they were unaware of that. They were then met by Niobe, who congratulated them ,though was sceptical of their forceful methods. 

Nescire

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: This crew, posing as Zion operatives, were discovered to be Cypherite loyalists. An operation was lead to detain them using joint operations in the Matrix and the real. A team 'killed' them in the Matrix, forcing them into the real where they were captured by Zion Hovercraft. Their current status is unknown.

Copaxrus

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Unconfirmed

Notes: This crew were assasinated by an unidentified assailant, presumably Cypherite, from the looks of things a renegade member pulled their jacks.

Rescate

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Unconfirmed

Notes: Waiting for verification

Pelageus

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Unconfirmed

Notes: The crew of this ship were killed in action by Cypherites.

Solstice

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: A crew of high ranking Cypherites operate from this ship

Hypnos II

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Tanarima
Affiliation: Cypherite

Notes: This crew, and their communication expert Tanarima in particular monitored the Cypherite splinter group "Sleepwalkers" during their campaign and reported back to the group leader Cryptos. 

Juggernaut

Captain: Cinquez
First Mate: Unknown
Operator: Unknown
Other Crew: Konneckz, DeeJack, Tirbodh
Affiliation: Zion

Notes: This ship was boarded by Cypherites, but before he could be captured the captain set off a self destruct killing himself and the intruders.

Eligius

Captain: Unknown
First Mate: Unknown
Operator: Unknown
Other Crew: Perkinggs, Aryo, Randfield
Affiliation: Unconfirmed

Notes: Waiting for verification

Crescendo

Captain: Suda
First Mate: Unknown
Operator: Unknown
Other Crew: Brillante, Pernicia
Affiliation: Unconfirmed

Notes: This crew were captured and held at gunpoint to get information for the Cypherites, Pernicia, a member of their crew was in fact a Cypherite spy, and pretended to be under duress to force her crewmate to give up their captain's location. She was later transferred to a Cypherite craft.

Diced's Ship

Captain: Diced(?)
First Mate: Unknown
Operator: Schwartzwald
Other Crew: Caigne, Kabarr, 6414(Gaia), Phasmata, Kisoku, Piqo, Toro Furioso
Affiliation: Unconfirmed

Notes: Waiting for verification

The Hand of God

Captain: Steelle
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: EPN

Notes: This crew brought Zion commander Lock from the Old City to the transfer point and battled against enemy ships when the meeting was ambushed, leading the EPN forces in the skirmish. 

The Titan

Captain: RedBindi
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This ship met with EPN forces and was able to transfer Lock from EPN to New Zion safely, despite engaging with hostile forces.

The Saltpillar

Captain: Neoteny
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This ship led the Zion forces in the transfer of Commander Lock.

The Mambo

Captain: Mathalos
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Machines

Notes: This ship lead the Machine Hovercraft force in an unsuccesful strike at Zion commander Jason Lock

Aeria Gloris

Captain: Tranque
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Merovingian

Notes: This ship lead Merovingian hovercraft during the battle around Commander Lock's transfer

The Gravitas

Captain: Niobay
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: This ship lead Cypherite forces in the battle to capture Jason Lock

Manua's Legacy

Captain: Gerik
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Unconfirmed

Notes: This ship was part of the EPN fleet when Lock was transferred to New Zion

The Gilead II

Captain: Lt0Brien
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: EPN

Notes: This ship was part of the EPN fleet when Lock was transferred to New Zion

The Rocinate

Captain: ShiXinFeng
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: EPN

Notes: This ship was part of the EPN fleet when Lock was transferred to New Zion

The Devildog

Captain: Fenshire
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This ship was part of the Zion fleet sent to retrieve Lock from EPN

The Shadrack

Captain: Deffdog
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Zion

Notes: This ship was part of the Zion fleet sent to retrieve Lock from EPN

The Chaos

Captain: Yasamuu
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Machines

Notes: This ship was part of the Machine fleet sent to the transfer of Jason Lock

The Ishtar

Captain: Illyria1
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Machines

Notes: This ship was part of the Machine fleet sent to the transfer of Jason Lock

The Kaos

Captain: Sontag
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Machines

Notes: This ship was part of the Machine fleet sent to the transfer of Jason Lock

The Quinotaur

Captain: Sieges
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Merovingian

Notes: This ship was part of the Merovingian's forces sent to the transfer of Jason Lock

Silent Hearts

Captain: Recession
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Merovingian

Notes: This ship was part of the Merovingian's forces sent to the transfer of Jason Lock

The Kalevala

Captain: Marias
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: This ship was part of a Cypherite attempt to disrupt Jason Lock's transfer

Dark Sky

Captain: Royin
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: This ship was part of a Cypherite attempt to disrupt Jason Lock's transfer

Thought Crime

Captain: NightTrace
First Mate: Unknown
Operator: Unknown
Other Crew: Unknown
Affiliation: Cypherite

Notes: This ship was part of a Cypherite attempt to disrupt Jason Lock's transfer

Most of these are from the Wikipedia site. I wrote the Scanline one a good while ago before some of the new people popped up, so it may not be entirely up-to-date. I also wrote the Blue Dreamer one on there (but what's here is obviously right). I'm not 100% on the Novalis II or Diced's Crew. 

Blue Dreamer

• Captain: Cryptos
• First mate: Veil
• Pilot: Unknown
• Operator: Unknown
• Other crew: Liaisons

Mjolnir II

• Captain: Colt
• First mate: Unknown
• Pilot: Unknown
• Operator: Unknown
• Other crew: Unknown
  (Note - Colt's details in game list his crew as Logos II, likely for convenience of contact with liaisons) 

Nabonidus

• Captain: Morpheus
• First mate: Unknown/None
• Pilot: Unknown/None
• Operator: Unknown/None
• Other crew: Unknown/None

Neo's Hope

• Captain: Kid
• First mate: Shimada
• Pilot: Unknown
• Operator: Unknown
• Other crew: Liaisons

Novalis II

• Captain: Sawayaka
• First mate: WanNi
• Pilot: Neurophyte
• Operator: Tamarin
• Other crew: Vashuo, Lelan, Toorima, Oniyuzu, Odran, Al3xandra

Scanline

• Captain: Unknown
• First mate: Unknown
• Pilot: Unknown
• Operator: Unknown
• Other crew: Strayshot, Acheronia, Theptism, Trifid, Soniya (Recursion), Alethiana, Daxil, Derouter, Leton, Runtrace (Syntax), Betzalel, Kaveri, Palliate (Vector).

Diced's Crew (I'm probably not the best authority on this one)

• Captain: Diced?
• First Mate: Kitasu?
• Pilot: Unknown?
• Operator: Schwartzwald
• Other Crew: Caigne, Kabarr, 6414 (Gaia), Phasmata, Kisoku, Piqo, Toro Furioso

Recognized Player Ships

The Hand of God

• Captain: Steelle
• Notability: EPN ship which Lock disembarked Old Zion for New Zion in. Participated in Lock's transfer battle and led EPN's forces.

The Titan

• Captain: RedBindi
• Notability: Zion ship which Lock was transferred onto at the end of Lock's transfer battle and carried him the rest of the way to New Zion. Participated in Lock's transfer battle.

The Saltpillar

• Captain: Neoteny
• Notability: Zion ship which led the Zion forces in Lock's transfer battle.

The Mambo

• Captain: Mathalos
• Notability: Machinist ship which led Machinist forces in Lock's transfer battle.

Aeria Gloris

• Captain: TranqueThePhilosophe
• Notability: Merovingian ship which led Merovingian forces in Lock's transfer battle.

The Gravitas

• Captain: Niobay
• Notability: Cypherite ship which led Cypherite forces in Lock's transfer battle.

Manua's Legacy

• Captain: Gerik
• Notability: EPN ship which participated in Lock's transfer battle.

The Gilead II

• Captain: Lt0Brien
• Notability: EPN ship which participated in Lock's transfer battle.

The Rocinate

• Captain: ShiXinFeng
• Notability: EPN ship which participated in Lock's transfer battle.

The Devildog

• Captain: Fenshire
• Notability: Zion ship which participated in Lock's transfer battle.

The Shadrack

• Captain: Deffdog
• Notability: Zion ship which participated in Lock's transfer battle.

The Chaos

• Captain: Yasamuu
• Notability: Machinist ship which participated in Lock's transfer battle.

The Ishtar

• Captain: Illyria1
• Notability: Machinist ship which participated in Lock's transfer battle.

The Kaos

• Captain: Sontag
• Notability: Machinist ship which participated in Lock's transfer battle.

The Quinotaur

• Captain: Sieges
• Notability: Merovingian ship which participated in Lock's transfer battle.

Silent Hearts

• Captain: Recession
• Notability: Merovingian ship which participated in Lock's transfer battle.

The Kalevala

• Captain: Marias
• Notability: Cypherite ship which participated in Lock's transfer battle.

Dark Sky

• Captain: Royin
• Notability: Cypherite ship which participated in Lock's transfer battle.

Thought Crime

• Captain: NightTrace
• Notability: Cypherite shipw hich participated in Lock's transfer battle.

Well, Bindi and Steelle had credits in a Zion critical mission and live event wrap-up. But I figured it'd be good to include everyone that was there.

And yes, there have been several ships which have been captured by Cypherites over the years. I don't remember that particular name, but there was one which Davot was the captain of, and he had another crew member with him. They were both killed.

I don't know if it's worth including, but there was an unnamed Zion ship which had a spy aboard it some time ago that I helped root out. Its crew were:

John Scottmeir
Mary Cornell
Ben Sheridan
Annette Kunkel
Chaz Stallin aka Conneron, Cypherite spy

When Conneron was found out, he tried to hold up in the Matrix with a bunch of Cypherites, but was escorted to a hardline where we forced him to jack out and he was apprehended by the rest of the crew. So the crew is technically intact and all, though I doubt we'd see it out there.

And, I just did a little checking into the different crews for org leaders, and while I'm not sure that's true, it seems that a previous Recursion EPN liaison, Zeissman, had his crew listed as "Inner Sanctum." I remembered that he had some sort of different crew listed, but I never got an explanation to it. Most of the time, I think we just look at the crew listed for the character, but it could be the same case as it is with Colt, the wrong crew for convenience's sake. That said, I've never seen it said that Veil and Shimada have their own ships apart from the Blue Dreamer or the Neo's Hope. But it's worth adding in addition that since the Machines and Merovingian don't have ships in the real, their liaisons have their own unidentified ships.

As for addtional crews, Strenlo has a crew out there somewhere despite his death (in 8.3.whatever, Tyndall says that his operator confirms his death), as does Joshua Maston, who has made repeat appearances, but seems to work alone.

Ah - and there's the Cypherite ship that Khursun was transferred onto when they suspected that he was involved with Viraconrida's disappearance. It was called Phlegethon and another crew member was Glycon and another (I think) was Jenyi. Khursun was killed when TantaIos uploaded a flame virus to him soon thereafter or something, and I don't recall seeing anyone from that crew again, though TantaIos, an associated program or person who was not aboard the crew was seen again for a while.

And was "Jico" one of the Scanline names I missed? I'm scrolling through old screenshots and in a chat I had with Acheronia, she mentioned him giving her submachine guns. Or is that some player I'm unacquainted with?

And was "Jico" one of the Scanline names I missed? I'm scrolling through old screenshots and in a chat I had with Acheronia, she mentioned him giving her submachine guns. Or is that some player I'm unacquainted with?

Little correction on that list of canonic player hovercrafts: Sieges's ship is The Quinotaur with a U (like "minotaur" but hee, it's an odd word.

Thanks a lot for getting involved folks, please ignore my finnickyness and post any ships you feel are significant. I'll post up those ships and crews now. I'm also gonna add a "notes" section to add details for ships that don't have crew members named etc. My notes will probably be incomplete and sketchy so don't hesitate to mention any alterations/corrections you can think of.

Thanks again

Fyre

OK, finally got around to adding a few more from Othinn's list - cheers muchly for those. There's a few bits I'd like more confirmation on before posting, but still very helpful. I also noticed a few of the names of ships weren't actually mentioned in the events - I'm happy to take your word for it, but I'm also interested in how you found out the names.



I'll hopefully add one or two more ships soon and I'm gonna try and add "Affiliation" to each ship as well.